Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Mir466f-3-201ENSMUST00000104788 94 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm14036-201ENSMUST00000118248 480 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.98□□□□□ -0.97
Rfx1P48377 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm22339-201ENSMUST00000157718 62 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm27817-201ENSMUST00000184302 233 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm6799-201ENSMUST00000186919 573 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm36966-201ENSMUST00000192217 413 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm37987-201ENSMUST00000194999 825 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm4602-201ENSMUST00000203198 308 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm18362-201ENSMUST00000221786 529 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm46379-201ENSMUST00000222551 265 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Rfx1P48377 Gnpnat1-202ENSMUST00000226276 710 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 AC156574.2-201ENSMUST00000228023 282 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm43319-201ENSMUST00000198036 2270 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Rfx1P48377 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rfx1P48377 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rfx1P48377 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.98□□□□□ -0.97
Rfx1P48377 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Mir546-201ENSMUST00000102105 121 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rfx1P48377 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm15715-201ENSMUST00000118032 283 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Mir6930-201ENSMUST00000183859 68 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm8506-201ENSMUST00000186661 829 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm38333-201ENSMUST00000193608 604 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm8010-201ENSMUST00000194128 873 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC8.97□□□□□ -0.97
Rfx1P48377 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm18995-201ENSMUST00000202981 520 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm44665-201ENSMUST00000205381 251 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Gm4536-201ENSMUST00000209157 542 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC8.97□□□□□ -0.97
Rfx1P48377 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Rfx1P48377 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 AL645704.1-201ENSMUST00000221642 604 ntBASIC8.97□□□□□ -0.97
Rfx1P48377 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rfx1P48377 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms