Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gm25083-201ENSMUST00000102319 92 ntBASIC6.33□□□□□ -1.4
P20040 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
P20040 Gm25276-201ENSMUST00000104300 124 ntBASIC6.33□□□□□ -1.4
P20040 Gm15913-201ENSMUST00000118492 331 ntBASIC6.33□□□□□ -1.4
P20040 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.33□□□□□ -1.4
P20040 Gm13006-201ENSMUST00000118683 214 ntBASIC6.33□□□□□ -1.4
P20040 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Trav8-2-201ENSMUST00000130122 337 ntBASIC6.33□□□□□ -1.4
P20040 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.33□□□□□ -1.4
P20040 Gm21182-201ENSMUST00000178899 794 ntBASIC6.33□□□□□ -1.4
P20040 Mir8114-201ENSMUST00000183582 111 ntBASIC6.33□□□□□ -1.4
P20040 Mir6409-201ENSMUST00000184957 92 ntBASIC6.33□□□□□ -1.4
P20040 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gm18352-201ENSMUST00000189113 902 ntBASIC6.33□□□□□ -1.4
P20040 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.33□□□□□ -1.4
P20040 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.33□□□□□ -1.4
P20040 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.33□□□□□ -1.4
P20040 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.33□□□□□ -1.4
P20040 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.33□□□□□ -1.4
P20040 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.33□□□□□ -1.4
P20040 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.33□□□□□ -1.4
P20040 Gm5791-201ENSMUST00000220840 489 ntBASIC6.33□□□□□ -1.4
P20040 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
P20040 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
P20040 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
P20040 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.33□□□□□ -1.4
P20040 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.33□□□□□ -1.4
P20040 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
P20040 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
P20040 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P20040 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.32□□□□□ -1.4
P20040 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.32□□□□□ -1.4
P20040 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.32□□□□□ -1.4
P20040 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.32□□□□□ -1.4
P20040 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P20040 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P20040 Gm22470-201ENSMUST00000104117 130 ntBASIC6.32□□□□□ -1.4
P20040 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.32□□□□□ -1.4
P20040 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
P20040 Gm6382-201ENSMUST00000118873 942 ntBASIC6.32□□□□□ -1.4
P20040 Gm14465-201ENSMUST00000120603 567 ntBASIC6.32□□□□□ -1.4
P20040 Gm24893-201ENSMUST00000122745 369 ntBASIC6.32□□□□□ -1.4
P20040 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.32□□□□□ -1.4
P20040 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.32□□□□□ -1.4
P20040 Gm9697-201ENSMUST00000147052 997 ntBASIC6.32□□□□□ -1.4
P20040 Gm23392-201ENSMUST00000157580 113 ntBASIC6.32□□□□□ -1.4
P20040 Gm24782-201ENSMUST00000157641 132 ntBASIC6.32□□□□□ -1.4
P20040 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.32□□□□□ -1.4
P20040 Gm7418-201ENSMUST00000162120 801 ntBASIC6.32□□□□□ -1.4
P20040 Gm21430-201ENSMUST00000182998 998 ntBASIC6.32□□□□□ -1.4
P20040 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC6.32□□□□□ -1.4
P20040 Gm4785-201ENSMUST00000191025 751 ntBASIC6.32□□□□□ -1.4
P20040 Gm37225-201ENSMUST00000193423 325 ntBASIC6.32□□□□□ -1.4
P20040 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.32□□□□□ -1.4
P20040 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.32□□□□□ -1.4
P20040 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.32□□□□□ -1.4
P20040 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.32□□□□□ -1.4
P20040 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.32□□□□□ -1.4
P20040 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.32□□□□□ -1.4
P20040 Gm8804-201ENSMUST00000212292 798 ntBASIC6.32□□□□□ -1.4
P20040 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.32□□□□□ -1.4
P20040 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.32□□□□□ -1.4
P20040 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
P20040 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.32□□□□□ -1.4
P20040 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
P20040 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.32□□□□□ -1.4
P20040 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
P20040 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms