Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm12021-201ENSMUST00000121061 1746 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm24373-201ENSMUST00000104393 132 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm15576-201ENSMUST00000117806 583 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm14036-201ENSMUST00000118248 480 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm13183-201ENSMUST00000118615 789 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm13252-201ENSMUST00000119355 321 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm14528-201ENSMUST00000120615 231 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm12754-201ENSMUST00000121908 454 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm24994-201ENSMUST00000157414 121 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm24883-201ENSMUST00000158391 281 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm24738-201ENSMUST00000158856 123 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm8065-201ENSMUST00000164048 605 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Mir5100-201ENSMUST00000174993 64 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm6610-201ENSMUST00000186324 358 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm29517-201ENSMUST00000190744 351 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm29072-201ENSMUST00000191149 678 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx1P18111 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Cdx1P18111 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 CT009556.3-201ENSMUST00000226173 513 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdx1P18111 Olfr888-201ENSMUST00000075228 945 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx1P18111 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Gm37984-201ENSMUST00000191641 3733 ntBASIC5.86□□□□□ -1.47
Cdx1P18111 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx1P18111 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm42514-201ENSMUST00000196636 1832 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm45112-201ENSMUST00000208576 5125 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm6350-201ENSMUST00000195099 1339 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 AC159624.1-201ENSMUST00000217762 1344 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm28497-201ENSMUST00000189646 3029 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm24334-201ENSMUST00000104210 128 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm24472-201ENSMUST00000104484 132 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Fau-ps2-201ENSMUST00000119333 371 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm5931-201ENSMUST00000121308 477 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm22915-201ENSMUST00000157615 136 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm7418-201ENSMUST00000162120 801 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm17129-201ENSMUST00000168168 505 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdx1P18111 Mir7005-201ENSMUST00000185089 69 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Cdx1P18111 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm28443-201ENSMUST00000189081 698 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm37392-201ENSMUST00000192098 516 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx1P18111 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm42429-201ENSMUST00000198579 558 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm21040-201ENSMUST00000199493 1132 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm42573-201ENSMUST00000202327 478 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm21054-201ENSMUST00000203981 380 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 Gm18207-201ENSMUST00000205486 526 ntBASIC5.85□□□□□ -1.47
Cdx1P18111 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC5.85□□□□□ -1.47
Cdx1P18111 Gm33096-201ENSMUST00000210189 493 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms