Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 AC174459.1-201ENSMUST00000224476 1943 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Lire1P11260 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.07□□□□□ -1.28
Lire1P11260 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.07□□□□□ -1.28
Lire1P11260 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.07□□□□□ -1.28
Lire1P11260 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Lire1P11260 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Gm28239-201ENSMUST00000190225 447 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Gm38305-201ENSMUST00000194825 223 ntBASIC7.07□□□□□ -1.28
Lire1P11260 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.07□□□□□ -1.28
Lire1P11260 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7.07□□□□□ -1.28
Lire1P11260 Gm18484-201ENSMUST00000204389 991 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Gm45401-201ENSMUST00000209456 733 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC7.07□□□□□ -1.28
Lire1P11260 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.07□□□□□ -1.28
Lire1P11260 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.07□□□□□ -1.28
Lire1P11260 CT009556.2-201ENSMUST00000227980 1123 ntBASIC7.07□□□□□ -1.28
Lire1P11260 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Lire1P11260 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Lire1P11260 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Lire1P11260 Gm6818-201ENSMUST00000190556 2558 ntBASIC7.07□□□□□ -1.28
Lire1P11260 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Lire1P11260 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Lire1P11260 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Lire1P11260 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Lire1P11260 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Lire1P11260 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm8428-201ENSMUST00000159919 1784 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
Lire1P11260 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm25083-201ENSMUST00000102319 92 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Lire1P11260 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.06□□□□□ -1.28
Lire1P11260 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm7129-201ENSMUST00000117402 997 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm6798-201ENSMUST00000119961 360 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm12005-201ENSMUST00000121451 379 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm11434-201ENSMUST00000122379 629 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm6689-201ENSMUST00000130905 481 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC7.06□□□□□ -1.28
Lire1P11260 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC7.06□□□□□ -1.28
Lire1P11260 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm17235-201ENSMUST00000169128 964 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm17223-201ENSMUST00000171413 481 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm26587-201ENSMUST00000180795 989 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Gm28894-201ENSMUST00000185214 615 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm28186-201ENSMUST00000187447 679 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm28573-201ENSMUST00000187821 380 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm28443-201ENSMUST00000189081 698 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm28400-201ENSMUST00000191332 380 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm37369-201ENSMUST00000194179 615 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm43243-201ENSMUST00000199964 278 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Lire1P11260 Gm44979-201ENSMUST00000206218 287 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm4259-201ENSMUST00000206489 758 ntBASIC7.06□□□□□ -1.28
Lire1P11260 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm7392-201ENSMUST00000217815 345 ntBASIC7.06□□□□□ -1.28
Lire1P11260 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Gm7986-201ENSMUST00000221336 551 ntBASIC7.06□□□□□ -1.28
Lire1P11260 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC7.06□□□□□ -1.28
Lire1P11260 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.06□□□□□ -1.28
Lire1P11260 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Lire1P11260 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Lire1P11260 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms