Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Col1a1P11087 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Col1a1P11087 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 AU020206-202ENSMUST00000206358 3009 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Col1a1P11087 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm22275-201ENSMUST00000122470 310 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm22518-201ENSMUST00000158267 68 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm23386-201ENSMUST00000158585 144 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm28586-201ENSMUST00000189857 456 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm44943-201ENSMUST00000207254 300 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm44565-201ENSMUST00000208194 269 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm45432-201ENSMUST00000210391 416 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.35□□□□□ -1.07
Col1a1P11087 AC107663.1-201ENSMUST00000224257 468 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col1a1P11087 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Col1a1P11087 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.35□□□□□ -1.07
Col1a1P11087 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.35□□□□□ -1.07
Col1a1P11087 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Col1a1P11087 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Col1a1P11087 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm24272-201ENSMUST00000102329 98 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Col1a1P11087 n-R5s16-201ENSMUST00000104555 119 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Gm12842-201ENSMUST00000117298 476 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Gm12710-201ENSMUST00000119011 216 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm23810-201ENSMUST00000175150 74 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm29784-201ENSMUST00000196217 406 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Col1a1P11087 AC131029.2-201ENSMUST00000226696 628 ntBASIC8.34□□□□□ -1.07
Col1a1P11087 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Col1a1P11087 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Col1a1P11087 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm23748-201ENSMUST00000104227 131 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm8812-201ENSMUST00000118496 412 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm5793-201ENSMUST00000119393 630 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm13237-201ENSMUST00000122151 635 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm12152-201ENSMUST00000122465 684 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm23968-201ENSMUST00000175047 125 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm4956-202ENSMUST00000178869 672 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm27601-201ENSMUST00000184794 127 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm2229-201ENSMUST00000193328 710 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.33□□□□□ -1.08
Col1a1P11087 Gm5154-201ENSMUST00000203971 399 ntBASIC8.33□□□□□ -1.08
Col1a1P11087 Gm4556-201ENSMUST00000217808 355 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms