Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm11622-201ENSMUST00000120525 691 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm6451-201ENSMUST00000121488 717 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm22275-201ENSMUST00000122470 310 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm16248-201ENSMUST00000124238 243 ntBASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc180J3QNE4 Gm4927-201ENSMUST00000219548 1318 ntBASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 AC124601.1-201ENSMUST00000220531 135 ntBASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 AC129308.1-201ENSMUST00000223800 2309 ntBASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Gm37647-201ENSMUST00000194556 3143 ntBASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccdc180J3QNE4 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Mbnl2-203ENSMUST00000226800 3328 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm14865-201ENSMUST00000117523 494 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm14893-201ENSMUST00000117904 282 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm14466-201ENSMUST00000119028 451 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm12518-201ENSMUST00000122075 779 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm13669-201ENSMUST00000122366 457 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm3344-201ENSMUST00000169610 603 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm43762-201ENSMUST00000201521 295 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm2139-201ENSMUST00000222569 1075 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm6575-201ENSMUST00000222946 697 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Zfp865-202ENSMUST00000076791 1129 ntBASIC12.96□□□□□ -0.34
Ccdc180J3QNE4 Gm44101-201ENSMUST00000203951 2221 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm13301-201ENSMUST00000121728 2446 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm15765-201ENSMUST00000118407 910 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm12710-201ENSMUST00000119011 216 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm43555-201ENSMUST00000196588 310 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm42673-201ENSMUST00000202676 337 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm44163-201ENSMUST00000205140 475 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 AC091237.1-201ENSMUST00000224911 637 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 CT009711.2-201ENSMUST00000225352 934 ntBASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ccdc180J3QNE4 Gm45887-201ENSMUST00000212672 2998 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm23979-201ENSMUST00000104071 128 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm13983-201ENSMUST00000118018 865 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm13754-201ENSMUST00000120486 998 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm15164-201ENSMUST00000122203 271 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm5456-201ENSMUST00000170706 844 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm17045-201ENSMUST00000178600 844 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm2926-201ENSMUST00000205625 239 ntBASIC12.94□□□□□ -0.34
Ccdc180J3QNE4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms