Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm7113-201ENSMUST00000120477 958 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm16057-201ENSMUST00000120811 759 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm15300-201ENSMUST00000122324 279 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm25387-201ENSMUST00000157813 132 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Gm14035-201ENSMUST00000117596 1475 ntBASIC9.95□□□□□ -0.82
Scaf11E9PZM7 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm25724-201ENSMUST00000104531 117 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Mir3078-201ENSMUST00000175231 87 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm35108-201ENSMUST00000194321 699 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm33191-201ENSMUST00000195604 699 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm18690-201ENSMUST00000204488 985 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm5612-201ENSMUST00000053326 375 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 AC153940.1-201ENSMUST00000220149 5300 ntBASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scaf11E9PZM7 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm12844-201ENSMUST00000119463 582 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm12438-201ENSMUST00000122034 336 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm3140-201ENSMUST00000163523 481 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm4373-201ENSMUST00000178571 556 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm43867-201ENSMUST00000203860 525 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm7769-201ENSMUST00000212900 933 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 CT009515.3-201ENSMUST00000226509 671 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 AC137902.1-201ENSMUST00000228184 102 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm38262-201ENSMUST00000194760 1382 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm9521-201ENSMUST00000206656 1516 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scaf11E9PZM7 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms