Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm45183-201ENSMUST00000207937 1497 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm13195-201ENSMUST00000117229 261 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm7206-201ENSMUST00000117730 508 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm4773-201ENSMUST00000120392 702 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm7212-201ENSMUST00000120817 348 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm26393-201ENSMUST00000157625 129 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm26000-201ENSMUST00000157991 107 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm22670-201ENSMUST00000158724 143 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm20396-201ENSMUST00000173358 745 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm20543-201ENSMUST00000174200 726 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm8529-201ENSMUST00000183298 745 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm29195-201ENSMUST00000189038 379 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm19777-201ENSMUST00000191940 358 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm5541-201ENSMUST00000193248 1113 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm36932-201ENSMUST00000195226 929 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm7946-201ENSMUST00000203326 958 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm17995-201ENSMUST00000209266 530 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 AC140451.2-202ENSMUST00000226156 574 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 AC154760.1-201ENSMUST00000227218 673 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 AC162301.1-201ENSMUST00000228785 1542 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm44531-201ENSMUST00000208364 2000 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 AC153143.1-201ENSMUST00000222966 1340 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Ube3bQ9ES34 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm37980-201ENSMUST00000194420 1910 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm37761-201ENSMUST00000194989 2098 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm38383-201ENSMUST00000194131 2660 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm8644-201ENSMUST00000118619 596 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm4918-201ENSMUST00000119420 1084 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm5387-201ENSMUST00000119776 857 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm15192-201ENSMUST00000121005 293 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm14982-201ENSMUST00000121102 442 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm16359-201ENSMUST00000124511 289 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm16357-201ENSMUST00000144091 474 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm23663-201ENSMUST00000158045 80 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm5698-201ENSMUST00000178317 724 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm6100-201ENSMUST00000180253 403 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm29492-201ENSMUST00000187124 457 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm28980-201ENSMUST00000187877 219 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm18426-201ENSMUST00000191874 973 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm2077-201ENSMUST00000195017 319 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm43396-201ENSMUST00000197506 706 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm40319-201ENSMUST00000199785 481 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm4259-201ENSMUST00000206489 758 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Gm9801-201ENSMUST00000054860 408 ntBASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Ube3bQ9ES34 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms