Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cdc40Q9DC48 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.71□□□□□ -1.34
Cdc40Q9DC48 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm37790-201ENSMUST00000193136 3346 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm25757-201ENSMUST00000103986 123 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm13739-201ENSMUST00000118020 530 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm11928-201ENSMUST00000119323 437 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm13877-201ENSMUST00000120614 417 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm12535-201ENSMUST00000121025 484 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm11263-201ENSMUST00000121853 749 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 AV026068-229ENSMUST00000225516 595 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 AC110176.1-201ENSMUST00000226219 504 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cdc40Q9DC48 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Cdc40Q9DC48 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms