Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smc1aQ9CU62 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm7599-201ENSMUST00000121453 796 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm25164-201ENSMUST00000158908 116 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm20637-201ENSMUST00000175715 462 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Mir7212-201ENSMUST00000184098 61 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm34144-201ENSMUST00000197039 259 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smc1aQ9CU62 Gm43961-201ENSMUST00000203289 1872 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm25276-201ENSMUST00000104300 124 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm26016-201ENSMUST00000104403 129 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm15129-201ENSMUST00000119673 279 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm12955-201ENSMUST00000119689 957 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm13776-201ENSMUST00000122236 1261 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Mir1983-201ENSMUST00000157523 132 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm3611-201ENSMUST00000173687 877 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm18699-201ENSMUST00000190713 243 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Trbv9-201ENSMUST00000194494 290 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm9652-201ENSMUST00000209345 163 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm46379-201ENSMUST00000222551 265 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smc1aQ9CU62 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms