Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm13438-201ENSMUST00000120100 573 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm22882-201ENSMUST00000157749 124 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm18131-201ENSMUST00000199241 449 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm45478-201ENSMUST00000209472 211 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm5948-201ENSMUST00000219627 839 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 AC102689.1-201ENSMUST00000220511 1090 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 AC125539.1-201ENSMUST00000227423 622 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm2840-201ENSMUST00000048361 411 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.73□□□□□ -1.33
Use1Q9CQ56 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Use1Q9CQ56 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm25276-201ENSMUST00000104300 124 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm6491-201ENSMUST00000118273 990 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm15665-201ENSMUST00000119116 847 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm11320-201ENSMUST00000119434 463 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm12817-201ENSMUST00000119622 610 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm13940-201ENSMUST00000121023 301 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm12642-201ENSMUST00000121098 876 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm14053-201ENSMUST00000121662 470 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm11203-201ENSMUST00000122169 741 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm24139-201ENSMUST00000122780 288 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm25437-201ENSMUST00000158282 132 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm27675-201ENSMUST00000184527 94 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Gm6807-201ENSMUST00000077435 888 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Use1Q9CQ56 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.72□□□□□ -1.33
Use1Q9CQ56 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.72□□□□□ -1.33
Use1Q9CQ56 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms