Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 AC107742.1-201ENSMUST00000227769 1390 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.04□□□□□ -1.12
Ccdc38Q8CDN8 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm5759-201ENSMUST00000119203 811 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm22342-201ENSMUST00000122647 298 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm15843-201ENSMUST00000146593 529 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm28341-201ENSMUST00000190883 472 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm37349-201ENSMUST00000194205 624 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm5154-201ENSMUST00000203971 399 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Ccdc38Q8CDN8 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc38Q8CDN8 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc38Q8CDN8 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.12
Ccdc38Q8CDN8 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Ccdc38Q8CDN8 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
Ccdc38Q8CDN8 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm23701-201ENSMUST00000103893 110 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm24373-201ENSMUST00000104393 132 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm13742-201ENSMUST00000118805 457 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm19840-201ENSMUST00000169624 882 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm20797-201ENSMUST00000177894 383 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm27972-201ENSMUST00000184720 137 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm45497-201ENSMUST00000211701 740 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm22865-201ENSMUST00000083949 214 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Ccdc38Q8CDN8 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms