Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm16357-201ENSMUST00000144091 474 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm26183-201ENSMUST00000157685 139 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm18848-201ENSMUST00000182069 792 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm8192-201ENSMUST00000182196 958 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm28580-201ENSMUST00000186767 88 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm43664-201ENSMUST00000196038 734 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm3511-201ENSMUST00000199823 204 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm44565-201ENSMUST00000208194 269 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Mir455-201ENSMUST00000093594 82 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Atg4aQ8C9S8 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm25498-201ENSMUST00000104424 129 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm14466-201ENSMUST00000119028 451 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm11517-201ENSMUST00000119491 387 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm15081-201ENSMUST00000119794 844 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm16248-201ENSMUST00000124238 243 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm8245-201ENSMUST00000182434 987 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm28428-201ENSMUST00000188886 697 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm30517-201ENSMUST00000197350 772 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm5119-201ENSMUST00000215858 634 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm10126-201ENSMUST00000221732 168 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.57□□□□□ -1.04
Atg4aQ8C9S8 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm25916-201ENSMUST00000104263 131 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm25379-201ENSMUST00000104338 114 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm13900-201ENSMUST00000119402 498 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Gm7418-201ENSMUST00000162120 801 ntBASIC8.56□□□□□ -1.04
Atg4aQ8C9S8 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms