Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm13195-201ENSMUST00000117229 261 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm12687-201ENSMUST00000119752 706 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm8084-201ENSMUST00000120807 752 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm15152-201ENSMUST00000121540 394 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm15038-201ENSMUST00000122144 296 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm25372-201ENSMUST00000158161 255 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm24883-201ENSMUST00000158391 281 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Mir1231-201ENSMUST00000175639 81 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm27435-201ENSMUST00000183588 88 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm8307-201ENSMUST00000187682 1150 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm42558-201ENSMUST00000200982 265 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm19032-201ENSMUST00000208584 592 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm7493-201ENSMUST00000085919 626 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trim47Q8C0E3 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm25273-201ENSMUST00000104295 115 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm11348-201ENSMUST00000118813 318 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm19203-201ENSMUST00000174049 939 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm25690-201ENSMUST00000175439 77 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm6799-201ENSMUST00000186919 573 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm29362-201ENSMUST00000187898 133 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm28728-201ENSMUST00000189087 405 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm36932-201ENSMUST00000195226 929 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm43237-201ENSMUST00000196835 1044 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm43015-201ENSMUST00000199087 565 ntBASIC8.88□□□□□ -0.99
Trim47Q8C0E3 Gm7946-201ENSMUST00000203326 958 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms