Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm29605-201ENSMUST00000190800 292 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm4856-201ENSMUST00000192696 1091 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm25617-202ENSMUST00000198387 132 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm9357-201ENSMUST00000207138 805 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm2774-201ENSMUST00000213650 1165 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm24451-201ENSMUST00000083353 133 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm42679-201ENSMUST00000197086 2906 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm37783-201ENSMUST00000192025 1856 ntBASIC10.03□□□□□ -0.8
Usp47Q8BY87 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Usp47Q8BY87 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Gm6451-201ENSMUST00000121488 717 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Gm23740-201ENSMUST00000157385 100 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Gm46231-201ENSMUST00000220152 314 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 CT009527.2-201ENSMUST00000225386 606 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 AC174678.3-201ENSMUST00000227568 362 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 n-R5s41-201ENSMUST00000083025 119 ntBASIC10.02□□□□□ -0.8
Usp47Q8BY87 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
Usp47Q8BY87 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Usp47Q8BY87 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Usp47Q8BY87 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Usp47Q8BY87 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Usp47Q8BY87 Gm38386-201ENSMUST00000194293 3421 ntBASIC10.02□□□□□ -0.81
Usp47Q8BY87 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Usp47Q8BY87 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Usp47Q8BY87 Gm13006-201ENSMUST00000118683 214 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm12375-201ENSMUST00000119331 921 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm25556-201ENSMUST00000158077 144 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm9672-201ENSMUST00000166437 425 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 AC156790.1-201ENSMUST00000226572 559 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm12919-201ENSMUST00000119855 1594 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm13156-201ENSMUST00000118348 321 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm15007-201ENSMUST00000119982 710 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm4956-202ENSMUST00000178869 672 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm28413-201ENSMUST00000189369 291 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm45279-201ENSMUST00000210315 391 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Gm4042-201ENSMUST00000216946 637 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 AC154904.1-201ENSMUST00000219510 312 ntBASIC10.01□□□□□ -0.81
Usp47Q8BY87 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Usp47Q8BY87 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms