Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gm37483-201ENSMUST00000194382 1484 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc40Q8BI79 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm15576-201ENSMUST00000117806 583 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm15481-201ENSMUST00000120264 539 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm12642-201ENSMUST00000121098 876 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm24883-201ENSMUST00000158391 281 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm27458-201ENSMUST00000185108 121 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm43558-201ENSMUST00000200155 210 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm30196-201ENSMUST00000208957 160 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm7392-201ENSMUST00000217815 345 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm5250-201ENSMUST00000059065 321 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.54□□□□□ -1.2
Ccdc40Q8BI79 Gm5605-201ENSMUST00000208940 1305 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm15665-201ENSMUST00000119116 847 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm12124-201ENSMUST00000120504 679 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm26407-201ENSMUST00000158504 307 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm28341-201ENSMUST00000190883 472 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm43555-201ENSMUST00000196588 310 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm45446-201ENSMUST00000209348 216 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm45399-201ENSMUST00000209955 1016 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm24046-201ENSMUST00000083111 165 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm24613-201ENSMUST00000083266 130 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 CT009757.6-201ENSMUST00000220661 2312 ntBASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Ccdc40Q8BI79 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms