Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm11850-201ENSMUST00000119679 479 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm11897-201ENSMUST00000121976 828 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm12864-201ENSMUST00000122207 1006 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Mir1903-201ENSMUST00000122574 80 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm22035-201ENSMUST00000157284 228 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Mir3085-201ENSMUST00000175493 89 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm28239-201ENSMUST00000190225 447 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm20819-201ENSMUST00000191091 925 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm42804-201ENSMUST00000199701 178 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm44003-201ENSMUST00000203024 490 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Hdhd2-208ENSMUST00000148955 3069 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 CT009530.1-201ENSMUST00000227348 2927 ntBASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Prpf38bQ80SY5 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm16007-201ENSMUST00000117837 286 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm15160-201ENSMUST00000120553 907 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm24241-201ENSMUST00000157787 145 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm6434-201ENSMUST00000163316 372 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm9027-201ENSMUST00000165914 661 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm38181-201ENSMUST00000181357 720 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm27755-201ENSMUST00000184623 132 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37282-201ENSMUST00000191987 164 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37665-201ENSMUST00000192353 149 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm36928-201ENSMUST00000192466 694 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37337-201ENSMUST00000192601 993 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37000-201ENSMUST00000193058 428 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm37325-201ENSMUST00000194971 694 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm43835-201ENSMUST00000195932 149 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm43535-201ENSMUST00000197846 164 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm4859-201ENSMUST00000199625 787 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm4605-201ENSMUST00000203148 625 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm44379-201ENSMUST00000204501 164 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm44268-201ENSMUST00000204814 164 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.35□□□□□ -1.07
Prpf38bQ80SY5 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms