Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm14279-201ENSMUST00000117142 332 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm10243-201ENSMUST00000117571 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm14893-201ENSMUST00000117904 282 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm24057-201ENSMUST00000158616 302 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm7481-201ENSMUST00000182020 995 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Mir8094-201ENSMUST00000183361 117 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm27866-201ENSMUST00000184459 171 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm6472-202ENSMUST00000187973 582 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm28428-201ENSMUST00000188886 697 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm18428-201ENSMUST00000194986 791 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm8920-201ENSMUST00000196153 924 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm44982-201ENSMUST00000208795 471 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm45319-201ENSMUST00000210220 318 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 AC164550.1-201ENSMUST00000217821 1066 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 AC116502.1-201ENSMUST00000220989 291 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm10247-201ENSMUST00000090395 333 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm42668-201ENSMUST00000200747 2487 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Gm37535-201ENSMUST00000194442 2365 ntBASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Usp49Q6P9L4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Mir503-201ENSMUST00000102168 71 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm13768-201ENSMUST00000116469 929 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm15153-201ENSMUST00000119867 274 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm12459-201ENSMUST00000120659 356 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm11257-201ENSMUST00000121313 315 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm11263-201ENSMUST00000121853 749 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm22275-201ENSMUST00000122470 310 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm10416-201ENSMUST00000197379 645 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm43812-202ENSMUST00000202701 581 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm43928-201ENSMUST00000203737 409 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Gm22865-201ENSMUST00000083949 214 ntBASIC7.97□□□□□ -1.13
Usp49Q6P9L4 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms