Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Gm27299-201ENSMUST00000184593 103 ntBASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarca2Q6DIC0 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Smarca2Q6DIC0 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarca2Q6DIC0 Pcdh15-241ENSMUST00000195531 5241 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm3810-201ENSMUST00000122413 476 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm42443-201ENSMUST00000198084 1155 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm43212-201ENSMUST00000198208 394 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 AC156790.1-201ENSMUST00000226572 559 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 AC152394.1-201ENSMUST00000227360 1086 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gm43970-201ENSMUST00000204346 3605 ntBASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Smarca2Q6DIC0 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm43533-201ENSMUST00000202933 2936 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm45746-201ENSMUST00000212623 2447 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm25387-201ENSMUST00000157813 132 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm27512-201ENSMUST00000175328 126 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm36935-201ENSMUST00000192526 292 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm43945-201ENSMUST00000203595 754 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 AC147782.1-201ENSMUST00000219169 475 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 AC161252.1-201ENSMUST00000225536 467 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 AC137902.1-201ENSMUST00000228184 102 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 AC132833.4-201ENSMUST00000228313 203 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm26442-201ENSMUST00000082588 153 ntBASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarca2Q6DIC0 Gm43497-201ENSMUST00000201137 2316 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm28581-201ENSMUST00000186086 2177 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm25346-201ENSMUST00000104509 128 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm5401-201ENSMUST00000122444 365 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm8192-201ENSMUST00000182196 958 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm6931-201ENSMUST00000183103 371 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm27210-201ENSMUST00000184263 402 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm7554-201ENSMUST00000202282 574 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smarca2Q6DIC0 Gm38001-201ENSMUST00000192900 3761 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms