Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Gm45354-201ENSMUST00000199820 2557 ntBASIC8.52□□□□□ -1.05
Vps54Q5SPW0 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Vps54Q5SPW0 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Mir697-201ENSMUST00000102316 109 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm11622-201ENSMUST00000120525 691 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm7599-201ENSMUST00000121453 796 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm11962-201ENSMUST00000145746 255 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm29383-201ENSMUST00000188284 480 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm28413-201ENSMUST00000189369 291 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm36932-201ENSMUST00000195226 929 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm5154-201ENSMUST00000203971 399 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Vps54Q5SPW0 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm14466-201ENSMUST00000119028 451 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm15316-201ENSMUST00000121082 421 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Mir1929-201ENSMUST00000158635 93 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm24157-201ENSMUST00000175265 111 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Mir8120-201ENSMUST00000185035 139 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm42782-201ENSMUST00000197286 522 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm44565-201ENSMUST00000208194 269 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Gm22865-201ENSMUST00000083949 214 ntBASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Vps54Q5SPW0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Vps54Q5SPW0 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms