Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm11271-201ENSMUST00000116054 440 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm11257-201ENSMUST00000121313 315 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm22990-201ENSMUST00000175427 89 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm23187-201ENSMUST00000175746 86 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm27034-201ENSMUST00000182552 940 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm17908-201ENSMUST00000205552 1256 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Gm37902-201ENSMUST00000192839 1683 ntBASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sf3b2Q3UJB0 AC153152.1-201ENSMUST00000221105 2742 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm8215-201ENSMUST00000120627 990 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm4152-201ENSMUST00000172675 259 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm27998-201ENSMUST00000184902 361 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm17895-201ENSMUST00000194028 874 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sf3b2Q3UJB0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Phc3-203ENSMUST00000099163 2808 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Gm15128-201ENSMUST00000112814 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Gm43618-201ENSMUST00000197392 3451 ntBASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sf3b2Q3UJB0 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Mir760-201ENSMUST00000103257 119 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm12099-201ENSMUST00000118660 750 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm24011-201ENSMUST00000157732 268 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm27854-201ENSMUST00000175578 244 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm24756-201ENSMUST00000177002 96 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm5260-201ENSMUST00000186157 949 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm4083-201ENSMUST00000207158 451 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 Gm3678-201ENSMUST00000218888 492 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC9.46□□□□□ -0.9
Sf3b2Q3UJB0 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms