Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Klf5-202ENSMUST00000226784 2852 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm43168-201ENSMUST00000201039 1612 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm25311-201ENSMUST00000104136 132 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm25379-201ENSMUST00000104338 114 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm5611-201ENSMUST00000164523 852 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm26528-201ENSMUST00000181965 283 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Mir6921-201ENSMUST00000183719 80 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm8667-201ENSMUST00000211112 449 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.26□□□□□ -1.41
Nkx3-1P97436 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nkx3-1P97436 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm13615-201ENSMUST00000120242 1612 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm5752-201ENSMUST00000117771 594 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm15763-201ENSMUST00000120136 403 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm11622-201ENSMUST00000120525 691 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm12929-201ENSMUST00000122406 370 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm27014-201ENSMUST00000182658 937 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm43546-201ENSMUST00000196721 943 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.25□□□□□ -1.41
Nkx3-1P97436 Gm42713-201ENSMUST00000202709 945 ntBASIC6.25□□□□□ -1.41
Nkx3-1P97436 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms