Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.63□□□□□ -0.87
Nphp4P59240 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Gm18430-201ENSMUST00000197534 682 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.63□□□□□ -0.87
Nphp4P59240 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Nphp4P59240 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 CT010470.1-201ENSMUST00000225364 1876 ntBASIC9.63□□□□□ -0.87
Nphp4P59240 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nphp4P59240 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Gm16073-201ENSMUST00000116032 517 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm13754-201ENSMUST00000120486 998 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm12754-201ENSMUST00000121908 454 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm16248-201ENSMUST00000124238 243 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm4202-201ENSMUST00000169025 733 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm27804-201ENSMUST00000185135 119 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm29470-201ENSMUST00000188007 696 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm36965-201ENSMUST00000193797 394 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Gm43459-201ENSMUST00000202093 331 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm18012-201ENSMUST00000204558 773 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC9.62□□□□□ -0.87
Nphp4P59240 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nphp4P59240 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nphp4P59240 Gm38043-201ENSMUST00000195501 5141 ntBASIC9.62□□□□□ -0.87
Nphp4P59240 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nphp4P59240 Gm4073-201ENSMUST00000176792 3500 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Nphp4P59240 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC9.61□□□□□ -0.87
Nphp4P59240 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Nphp4P59240 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm37349-201ENSMUST00000194205 624 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.61□□□□□ -0.87
Nphp4P59240 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 AW822073-201ENSMUST00000075305 555 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm38173-201ENSMUST00000193126 2314 ntBASIC9.61□□□□□ -0.87
Nphp4P59240 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC9.61□□□□□ -0.87
Nphp4P59240 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Nphp4P59240 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Nphp4P59240 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Nphp4P59240 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms