Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm13878-201ENSMUST00000117986 577 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm12573-201ENSMUST00000118158 286 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm14251-201ENSMUST00000122133 279 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm4613-201ENSMUST00000165488 276 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm38022-201ENSMUST00000191762 403 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm6074-201ENSMUST00000193340 451 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Gm43377-201ENSMUST00000201640 455 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Msh6P54276 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.12□□□□□ -0.95
Msh6P54276 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Msh6P54276 Gm16020-201ENSMUST00000084281 210 ntBASIC9.12□□□□□ -0.95
Msh6P54276 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Msh6P54276 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Gm6866-201ENSMUST00000188559 2549 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Mir680-1-201ENSMUST00000102257 109 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Gm8812-201ENSMUST00000118496 412 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Gm13940-201ENSMUST00000121023 301 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.11□□□□□ -0.95
Msh6P54276 Gm11434-201ENSMUST00000122379 629 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Gm25178-201ENSMUST00000122633 325 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.11□□□□□ -0.95
Msh6P54276 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Gm7804-202ENSMUST00000194187 854 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Ighv8-3-201ENSMUST00000194985 295 ntBASIC9.11□□□□□ -0.95
Msh6P54276 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC9.11□□□□□ -0.95
Msh6P54276 Gm4808-201ENSMUST00000222283 1203 ntBASIC9.11□□□□□ -0.95
Msh6P54276 AC187103.4-201ENSMUST00000225399 300 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.11□□□□□ -0.95
Msh6P54276 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Msh6P54276 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Msh6P54276 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Msh6P54276 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Msh6P54276 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Msh6P54276 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
Msh6P54276 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Msh6P54276 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 AC187103.1-201ENSMUST00000224641 1475 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Msh6P54276 Gm22284-201ENSMUST00000104132 132 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Gm11445-201ENSMUST00000119101 532 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm11472-201ENSMUST00000121305 556 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm12369-201ENSMUST00000121343 942 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm4886-201ENSMUST00000121874 1176 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm11341-201ENSMUST00000122316 447 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm25969-201ENSMUST00000157166 132 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Mir1929-201ENSMUST00000158635 93 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm16027-201ENSMUST00000161618 758 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm9285-201ENSMUST00000177691 697 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.1□□□□□ -0.95
Msh6P54276 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Msh6P54276 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.1□□□□□ -0.95
Msh6P54276 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.1□□□□□ -0.95
Msh6P54276 Gm19175-201ENSMUST00000199895 916 ntBASIC9.1□□□□□ -0.95
Msh6P54276 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC9.1□□□□□ -0.95
Msh6P54276 AC164295.1-201ENSMUST00000224861 186 ntBASIC9.1□□□□□ -0.95
Msh6P54276 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms