Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm35323-201ENSMUST00000191836 499 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm37751-201ENSMUST00000192440 1198 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm37213-201ENSMUST00000193077 586 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm20223-201ENSMUST00000199932 805 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm8930-201ENSMUST00000201693 768 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 AC119894.1-201ENSMUST00000220399 350 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 AC211878.6-201ENSMUST00000221896 358 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Col18a1P39061 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Col18a1P39061 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC9.38□□□□□ -0.91
Col18a1P39061 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm35172-201ENSMUST00000196037 2649 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm24179-201ENSMUST00000158925 127 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Mir6361-201ENSMUST00000185079 101 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC9.37□□□□□ -0.91
Col18a1P39061 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Col18a1P39061 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.37□□□□□ -0.91
Col18a1P39061 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm24695-201ENSMUST00000083877 83 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm42685-201ENSMUST00000200378 2390 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.37□□□□□ -0.91
Col18a1P39061 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Snora47-201ENSMUST00000157483 138 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm37463-201ENSMUST00000193819 796 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Gm37709-201ENSMUST00000195074 600 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm43215-201ENSMUST00000199108 252 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Gm7463-201ENSMUST00000201541 547 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC9.37□□□□□ -0.91
Col18a1P39061 Gm9118-201ENSMUST00000219246 754 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 AC138765.3-201ENSMUST00000227981 423 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 AC139750.1-201ENSMUST00000223962 1300 ntBASIC9.37□□□□□ -0.91
Col18a1P39061 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Col18a1P39061 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Col18a1P39061 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
Col18a1P39061 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.36□□□□□ -0.91
Col18a1P39061 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col18a1P39061 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Col18a1P39061 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Col18a1P39061 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 228.3 ms