Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Pde6aP27664 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Pde6aP27664 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.38□□□□□ -1.07
Pde6aP27664 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pde6aP27664 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm23437-201ENSMUST00000104036 127 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Pde6aP27664 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm15188-201ENSMUST00000121264 704 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm11257-201ENSMUST00000121313 315 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm12752-201ENSMUST00000121657 811 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.37□□□□□ -1.07
Pde6aP27664 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm7418-201ENSMUST00000162120 801 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm26455-201ENSMUST00000175300 92 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm37604-201ENSMUST00000191749 1272 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm29759-201ENSMUST00000205860 327 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm45042-201ENSMUST00000207377 211 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm45100-201ENSMUST00000209153 391 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm19885-201ENSMUST00000212853 343 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 AC154828.2-201ENSMUST00000220908 1070 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm2840-201ENSMUST00000048361 411 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pde6aP27664 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pde6aP27664 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.37□□□□□ -1.07
Pde6aP27664 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.37□□□□□ -1.07
Pde6aP27664 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.37□□□□□ -1.07
Pde6aP27664 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Pde6aP27664 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm25757-201ENSMUST00000103986 123 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm13878-201ENSMUST00000117986 577 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm22025-201ENSMUST00000122734 302 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.36□□□□□ -1.07
Pde6aP27664 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm24057-201ENSMUST00000158616 302 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm28070-201ENSMUST00000191502 445 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm8539-201ENSMUST00000199822 501 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm43235-201ENSMUST00000200121 297 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm44971-201ENSMUST00000206192 337 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm44722-201ENSMUST00000206473 436 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pde6aP27664 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.36□□□□□ -1.07
Pde6aP27664 Gm18860-201ENSMUST00000212029 764 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Gm34424-201ENSMUST00000213400 782 ntBASIC8.36□□□□□ -1.07
Pde6aP27664 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.36□□□□□ -1.07
Pde6aP27664 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms