Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxd8P23463 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Hoxd8P23463 Gm6419-201ENSMUST00000097166 429 ntBASIC8.4□□□□□ -1.06
Hoxd8P23463 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxd8P23463 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxd8P23463 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.4□□□□□ -1.06
Hoxd8P23463 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Gm17821-201ENSMUST00000223448 1693 ntBASIC8.4□□□□□ -1.07
Hoxd8P23463 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.4□□□□□ -1.07
Hoxd8P23463 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxd8P23463 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm15923-201ENSMUST00000119300 1169 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm14360-201ENSMUST00000120670 393 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm15038-201ENSMUST00000122144 296 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC8.39□□□□□ -1.07
Hoxd8P23463 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm21909-201ENSMUST00000178260 439 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm7560-201ENSMUST00000187748 873 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm29362-201ENSMUST00000187898 133 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm38305-201ENSMUST00000194825 223 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm29745-201ENSMUST00000198005 687 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm20223-201ENSMUST00000199932 805 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm9373-201ENSMUST00000208724 599 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm5338-201ENSMUST00000209530 639 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC8.39□□□□□ -1.07
Hoxd8P23463 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 AC112274.2-201ENSMUST00000218436 170 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm6195-201ENSMUST00000063059 357 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Snora9-201ENSMUST00000082579 133 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm26264-201ENSMUST00000083278 159 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm20518-201ENSMUST00000150068 3811 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm45512-201ENSMUST00000210432 1553 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.39□□□□□ -1.07
Hoxd8P23463 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxd8P23463 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hoxd8P23463 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hoxd8P23463 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hoxd8P23463 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hoxd8P23463 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Hoxd8P23463 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.38□□□□□ -1.07
Hoxd8P23463 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.38□□□□□ -1.07
Hoxd8P23463 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms