Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm23659-201ENSMUST00000102245 110 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm12481-201ENSMUST00000102482 297 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm25501-201ENSMUST00000104429 132 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm11765-201ENSMUST00000121173 1205 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm22552-201ENSMUST00000157796 337 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm3326-201ENSMUST00000164656 1043 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm8164-201ENSMUST00000169120 1192 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm29197-201ENSMUST00000185922 702 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm29808-201ENSMUST00000194419 468 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm23786-202ENSMUST00000200181 119 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm44192-201ENSMUST00000204195 556 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm44213-201ENSMUST00000204977 703 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm44943-201ENSMUST00000207254 300 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm44984-201ENSMUST00000207802 394 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm8804-201ENSMUST00000212292 798 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm18619-201ENSMUST00000222722 1147 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sdc1P18828 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm25587-201ENSMUST00000082498 166 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Gm16020-201ENSMUST00000084281 210 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sdc1P18828 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.71□□□□□ -1.5
Sdc1P18828 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC5.71□□□□□ -1.5
Sdc1P18828 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sdc1P18828 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm7265-201ENSMUST00000192735 3502 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Sdc1P18828 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm14056-201ENSMUST00000117198 642 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm15626-201ENSMUST00000117478 868 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm8812-201ENSMUST00000118496 412 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm14251-201ENSMUST00000122133 279 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC5.7□□□□□ -1.5
Sdc1P18828 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm4613-201ENSMUST00000165488 276 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC5.7□□□□□ -1.5
Sdc1P18828 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm22408-201ENSMUST00000174925 65 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm23403-201ENSMUST00000179169 110 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm5435-201ENSMUST00000179295 1150 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm7678-201ENSMUST00000181879 943 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm8167-201ENSMUST00000183320 958 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Mir6337-201ENSMUST00000184194 105 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm29273-201ENSMUST00000188880 262 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm36980-201ENSMUST00000195643 622 ntBASIC5.7□□□□□ -1.5
Sdc1P18828 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.7□□□□□ -1.5
Sdc1P18828 Gm43157-201ENSMUST00000198223 412 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms