Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm37984-201ENSMUST00000191641 3733 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 n-R5s72-201ENSMUST00000104518 119 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm13176-201ENSMUST00000117910 477 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm5711-201ENSMUST00000197896 421 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Ighv1-83-201ENSMUST00000199643 351 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm18012-201ENSMUST00000204558 773 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC9.25□□□□□ -0.93
Hoxc9P09633 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 CT009742.1-201ENSMUST00000222507 702 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm9800-201ENSMUST00000052615 336 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxc9P09633 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm22748-201ENSMUST00000082493 136 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.25□□□□□ -0.93
Hoxc9P09633 AC130831.1-201ENSMUST00000224546 1474 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.25□□□□□ -0.93
Hoxc9P09633 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxc9P09633 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxc9P09633 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm12451-201ENSMUST00000121636 633 ntBASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm25574-201ENSMUST00000175245 249 ntBASIC9.24□□□□□ -0.93
Hoxc9P09633 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.24□□□□□ -0.93
Hoxc9P09633 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm22865-201ENSMUST00000083949 214 ntBASIC9.24□□□□□ -0.93
Hoxc9P09633 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Dalir-201ENSMUST00000188773 2170 ntBASIC9.24□□□□□ -0.93
Hoxc9P09633 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxc9P09633 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxc9P09633 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxc9P09633 Gm13081-201ENSMUST00000121527 5599 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Hoxc9P09633 Snord88a-201ENSMUST00000116723 90 ntBASIC9.23□□□□□ -0.93
Hoxc9P09633 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms