Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm23435-201ENSMUST00000157183 156 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm16184-201ENSMUST00000162324 573 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm8596-201ENSMUST00000188004 792 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm43576-201ENSMUST00000197937 871 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm17906-201ENSMUST00000202480 901 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm7565-201ENSMUST00000203611 623 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm44233-201ENSMUST00000203616 226 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm45213-201ENSMUST00000206065 304 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm44910-201ENSMUST00000208451 396 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm45877-201ENSMUST00000212110 564 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC6.74□□□□□ -1.33
Hoxd3P09027 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm6989-201ENSMUST00000218409 654 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 AC134254.3-201ENSMUST00000223533 575 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 AC132247.1-201ENSMUST00000225930 585 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 AC122774.1-201ENSMUST00000227703 762 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Arpc3-201ENSMUST00000031421 736 ntTSL 3 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm5185-201ENSMUST00000080271 619 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Zdhhc22-201ENSMUST00000095521 792 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm44937-201ENSMUST00000207705 2691 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Ap1b1-202ENSMUST00000101613 3735 ntTSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Spx-204ENSMUST00000211094 1510 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Slc7a13-201ENSMUST00000035890 2141 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Zfp667-205ENSMUST00000170776 3685 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Golm1-202ENSMUST00000095739 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Mboat2-202ENSMUST00000110942 2351 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm4275-205ENSMUST00000212624 1436 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm4962-201ENSMUST00000199640 2977 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Hotair-201ENSMUST00000151949 2006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm38024-201ENSMUST00000192338 2532 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Ednrb-202ENSMUST00000172237 3989 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Hoxd3P09027 Gm16536-201ENSMUST00000162209 1589 ntBASIC6.74□□□□□ -1.33
Hoxd3P09027 Ccdc162-211ENSMUST00000190522 1810 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Limk2-204ENSMUST00000110029 2939 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 4933436H12Rik-203ENSMUST00000207818 1466 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 AC154314.1-201ENSMUST00000223995 2996 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm37409-201ENSMUST00000195811 1626 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Cdhr2-201ENSMUST00000037145 4129 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Cldn12-203ENSMUST00000115446 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm46339-201ENSMUST00000222720 3539 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm11489-201ENSMUST00000118342 499 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm6136-201ENSMUST00000120149 891 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm14141-201ENSMUST00000120236 783 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm15111-201ENSMUST00000122142 878 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm22480-201ENSMUST00000122568 128 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm23885-201ENSMUST00000122682 294 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm15879-201ENSMUST00000139334 809 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm23149-201ENSMUST00000158837 230 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm16585-201ENSMUST00000161442 610 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Hoxd3P09027 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.73□□□□□ -1.33
Hoxd3P09027 Gm7316-201ENSMUST00000165395 445 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms