Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb2S4R1M3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.4■□□□□ 0.54
H2afb2S4R1M3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb2S4R1M3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
H2afb2S4R1M3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb2S4R1M3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb2S4R1M3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb2S4R1M3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Gm8495-201ENSMUST00000188740 694 ntBASIC18.35■□□□□ 0.53
H2afb2S4R1M3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb2S4R1M3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Gm26571-201ENSMUST00000181399 666 ntBASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb2S4R1M3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb2S4R1M3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
H2afb2S4R1M3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms