Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ClcnkaQ9WUB7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Gm10849-201ENSMUST00000100397 618 ntBASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ClcnkaQ9WUB7 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.89■□□□□ 0.3
ClcnkaQ9WUB7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ClcnkaQ9WUB7 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ClcnkaQ9WUB7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ClcnkaQ9WUB7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ClcnkaQ9WUB7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.86■□□□□ 0.29
ClcnkaQ9WUB7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClcnkaQ9WUB7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms