Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col13a1Q9R1N9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Gm27741-201ENSMUST00000185060 237 ntBASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col13a1Q9R1N9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col13a1Q9R1N9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
Col13a1Q9R1N9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col13a1Q9R1N9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 Mir5122-201ENSMUST00000175004 89 ntBASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col13a1Q9R1N9 AA386476-201ENSMUST00000098781 1665 ntBASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Gm44549-201ENSMUST00000208351 577 ntBASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col13a1Q9R1N9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Col13a1Q9R1N9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Col13a1Q9R1N9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms