Protein–RNA interactions for Protein: Q9JMB8

Cntn6, Contactin-6, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn6Q9JMB8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cntn6Q9JMB8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.13■□□□□ 0.81
Cntn6Q9JMB8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.12■□□□□ 0.81
Cntn6Q9JMB8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cntn6Q9JMB8 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Mtag2-201ENSMUST00000058665 714 ntBASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cntn6Q9JMB8 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Gm10698-201ENSMUST00000182663 604 ntBASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cntn6Q9JMB8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.08■□□□□ 0.81
Cntn6Q9JMB8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cntn6Q9JMB8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Gm10138-203ENSMUST00000206952 366 ntBASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cntn6Q9JMB8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cntn6Q9JMB8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms