Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx5Q9JL61 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rfx5Q9JL61 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx5Q9JL61 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Gm20049-201ENSMUST00000219950 730 ntBASIC19.46■□□□□ 0.71
Rfx5Q9JL61 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx5Q9JL61 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rfx5Q9JL61 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx5Q9JL61 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx5Q9JL61 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx5Q9JL61 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms