Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1fQ9JIS7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Gm13559-201ENSMUST00000120476 863 ntBASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1fQ9JIS7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1fQ9JIS7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1fQ9JIS7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Cacna1fQ9JIS7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1fQ9JIS7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1fQ9JIS7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1fQ9JIS7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1fQ9JIS7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.04■□□□□ 0.96
Cacna1fQ9JIS7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.03■□□□□ 0.96
Cacna1fQ9JIS7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacna1fQ9JIS7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
Cacna1fQ9JIS7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cacna1fQ9JIS7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Gm6659-201ENSMUST00000174752 547 ntBASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.01■□□□□ 0.95
Cacna1fQ9JIS7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1fQ9JIS7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms