Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubb3Q9ERD7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubb3Q9ERD7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubb3Q9ERD7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubb3Q9ERD7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Gm10602-201ENSMUST00000098239 609 ntBASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubb3Q9ERD7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubb3Q9ERD7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Gm38205-201ENSMUST00000192243 258 ntBASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tubb3Q9ERD7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubb3Q9ERD7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Tubb3Q9ERD7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.2■□□□□ 0.5
Tubb3Q9ERD7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms