Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nop56Q9D6Z1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Gm14117-201ENSMUST00000122417 843 ntBASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nop56Q9D6Z1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Rps24-207ENSMUST00000224568 714 ntBASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.94■□□□□ 0.62
Nop56Q9D6Z1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nop56Q9D6Z1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nop56Q9D6Z1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nop56Q9D6Z1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nop56Q9D6Z1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Nop56Q9D6Z1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nop56Q9D6Z1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.89■□□□□ 0.61
Nop56Q9D6Z1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms