Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Gm18671-201ENSMUST00000214826 683 ntBASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl8cQ9D6I0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl8cQ9D6I0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl8cQ9D6I0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Rtl8cQ9D6I0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl8cQ9D6I0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl8cQ9D6I0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rtl8cQ9D6I0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rtl8cQ9D6I0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rtl8cQ9D6I0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl8cQ9D6I0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl8cQ9D6I0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Gm5874-201ENSMUST00000096101 508 ntBASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rtl8cQ9D6I0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Gm42642-201ENSMUST00000200683 355 ntBASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.42■□□□□ 0.22
Rtl8cQ9D6I0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtl8cQ9D6I0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms