Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sf3a3Q9D554 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sf3a3Q9D554 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sf3a3Q9D554 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.66■□□□□ 0.58
Sf3a3Q9D554 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sf3a3Q9D554 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sf3a3Q9D554 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sf3a3Q9D554 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.64■□□□□ 0.58
Sf3a3Q9D554 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sf3a3Q9D554 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sf3a3Q9D554 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.62■□□□□ 0.57
Sf3a3Q9D554 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sf3a3Q9D554 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms