Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap53Q9D439 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap53Q9D439 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap53Q9D439 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cfap53Q9D439 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.17■□□□□ 0.82
Cfap53Q9D439 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cfap53Q9D439 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.16■□□□□ 0.82
Cfap53Q9D439 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap53Q9D439 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Gm6420-201ENSMUST00000193885 723 ntBASIC20.15■□□□□ 0.82
Cfap53Q9D439 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap53Q9D439 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap53Q9D439 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap53Q9D439 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Nespas-201ENSMUST00000143738 1083 ntBASIC20.14■□□□□ 0.81
Cfap53Q9D439 Gm42569-201ENSMUST00000200539 472 ntBASIC20.14■□□□□ 0.81
Cfap53Q9D439 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap53Q9D439 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.13■□□□□ 0.81
Cfap53Q9D439 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.13■□□□□ 0.81
Cfap53Q9D439 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.13■□□□□ 0.81
Cfap53Q9D439 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap53Q9D439 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.13■□□□□ 0.81
Cfap53Q9D439 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cfap53Q9D439 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.11■□□□□ 0.81
Cfap53Q9D439 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.11■□□□□ 0.81
Cfap53Q9D439 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap53Q9D439 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms