Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Raet1eQ9CZQ6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Raet1eQ9CZQ6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Raet1eQ9CZQ6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Raet1eQ9CZQ6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Gm7860-201ENSMUST00000121190 879 ntBASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Raet1eQ9CZQ6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Cap2-205ENSMUST00000225824 1634 ntBASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Raet1eQ9CZQ6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms