Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17■□□□□ 0.31
Trim13Q9CYB0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim13Q9CYB0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim13Q9CYB0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trim13Q9CYB0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm12922-201ENSMUST00000120626 809 ntBASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim13Q9CYB0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim13Q9CYB0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim13Q9CYB0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trim13Q9CYB0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Trim13Q9CYB0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trim13Q9CYB0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
Trim13Q9CYB0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim13Q9CYB0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Gm9847-201ENSMUST00000052528 599 ntBASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim13Q9CYB0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms