Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.91■□□□□ 0.62
Cldnd1Q9CQX5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Gm6345-202ENSMUST00000180900 204 ntBASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Gm38285-201ENSMUST00000192928 922 ntBASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cldnd1Q9CQX5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldnd1Q9CQX5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.89■□□□□ 0.62
Cldnd1Q9CQX5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Gm33142-201ENSMUST00000193913 867 ntBASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldnd1Q9CQX5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldnd1Q9CQX5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldnd1Q9CQX5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.86■□□□□ 0.61
Cldnd1Q9CQX5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Mir6349-201ENSMUST00000184059 97 ntBASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Gm18032-201ENSMUST00000222541 538 ntBASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cldnd1Q9CQX5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms