Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh15Q99PJ1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh15Q99PJ1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Gm27463-201ENSMUST00000183569 57 ntBASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdh15Q99PJ1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Mir2861-201ENSMUST00000175539 82 ntBASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.1■□□□□ 0.97
Pcdh15Q99PJ1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Gm14859-201ENSMUST00000117752 357 ntBASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Gm38027-201ENSMUST00000192315 235 ntBASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.09■□□□□ 0.97
Pcdh15Q99PJ1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Gm28033-201ENSMUST00000184224 96 ntBASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh15Q99PJ1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh15Q99PJ1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh15Q99PJ1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh15Q99PJ1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Pcdh15Q99PJ1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh15Q99PJ1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh15Q99PJ1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh15Q99PJ1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh15Q99PJ1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh15Q99PJ1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.06■□□□□ 0.96
Pcdh15Q99PJ1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh15Q99PJ1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Gm17661-201ENSMUST00000170317 270 ntBASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh15Q99PJ1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms