Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdh23Q99PF4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Cdh23Q99PF4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdh23Q99PF4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdh23Q99PF4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdh23Q99PF4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.88■□□□□ 0.61
Cdh23Q99PF4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gm7153-201ENSMUST00000117092 455 ntBASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gm22697-201ENSMUST00000175194 63 ntBASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdh23Q99PF4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.86■□□□□ 0.61
Cdh23Q99PF4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms