Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gtf2ird2Q99NI3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Gm27011-201ENSMUST00000182352 972 ntBASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gtf2ird2Q99NI3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gtf2ird2Q99NI3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gtf2ird2Q99NI3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.84■□□□□ 0.61
Gtf2ird2Q99NI3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.83■□□□□ 0.61
Gtf2ird2Q99NI3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gtf2ird2Q99NI3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gtf2ird2Q99NI3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms