Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.22■□□□□ 0.67
Tpgs1Q99MS8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpgs1Q99MS8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.21■□□□□ 0.67
Tpgs1Q99MS8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Tpgs1Q99MS8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tpgs1Q99MS8 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Gm29257-201ENSMUST00000186115 639 ntBASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tpgs1Q99MS8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tpgs1Q99MS8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tpgs1Q99MS8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tpgs1Q99MS8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tpgs1Q99MS8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tpgs1Q99MS8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Tpgs1Q99MS8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms