Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cttnbp2nlQ99LJ0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cttnbp2nlQ99LJ0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cttnbp2nlQ99LJ0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cttnbp2nlQ99LJ0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cttnbp2nlQ99LJ0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cttnbp2nlQ99LJ0 Fst-202ENSMUST00000223640 2612 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm43137-201ENSMUST00000198052 594 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.53■□□□□ 0.56
Cttnbp2nlQ99LJ0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cttnbp2nlQ99LJ0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cttnbp2nlQ99LJ0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cttnbp2nlQ99LJ0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cttnbp2nlQ99LJ0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms