Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.35■□□□□ 0.53
Cstf1Q99LC2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cstf1Q99LC2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cstf1Q99LC2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cstf1Q99LC2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Gm6659-201ENSMUST00000174752 547 ntBASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.32■□□□□ 0.52
Cstf1Q99LC2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cstf1Q99LC2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gm27741-201ENSMUST00000185060 237 ntBASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gm43183-201ENSMUST00000200632 547 ntBASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gm21814-202ENSMUST00000203277 873 ntBASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cstf1Q99LC2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cstf1Q99LC2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms